Information for 11-GCCACVTGTCACA (Motif 13)

C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
Reverse Opposite:
C A G T A T C G C G A T C T A G T C G A T A G C T C G A A G T C A C T G G A C T A C T G A C T G A G T C
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.689
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.73%
Number of Background Sequences with motif255.8
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets46.1 +/- 28.8bp
Average Position of motif in Background47.6 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PKNOX2/MA0783.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCCACVTGTCACA
TGACACCTGTCA--
 A C G T C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCCACVTGTCACA
GCCACGTGT----
 C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T A C G T

TGIF2/MA0797.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCACVTGTCACA
TGACAGCTGTCA--
 A C G T C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GCCACVTGTCACA
TGACACCTGTCA--
 A C G T C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCACVTGTCACA
GACACGTGCC---
 C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
C T A G T C G A T G A C C T G A G T A C T A C G G A C T A T C G A G T C T A G C A C G T A C G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GCCACVTGTCACA
GCCACGTG-----
 C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

HES5/MA0821.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-GCCACVTGTCACA
CGGCACGTGCCA--
 A C G T C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCACVTGTCACA
NNGTCGCGTGNCAC-
 A C G T A C G T C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C A C G T

HEY1/MA0823.1/Jaspar

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCACVTGTCACA
GACACGTGCC---
 C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCCACVTGTCACA
KCCACGTGAC---
 C T A G G T A C A G T C C T G A T G A C T C A G A G C T A T C G A G C T A G T C G C T A T A G C G T C A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T A C G T A C G T