Information for 10-GGTACGTCTG (Motif 12)

A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G C G T A G T A C T C A G A G C T C G T A A G T C A G T C
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.866
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif41.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets45.9 +/- 22.8bp
Average Position of motif in Background49.7 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.73
Offset:1
Orientation:forward strand
Alignment:GGTACGTCTG-
-VBSYGTCTGG
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0151.1_Myf6_2/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGTACGTCTG-----
GGNGCGNCTGTTNNN
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGTACGTCTG-
---CTGTCTGG
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

PB0094.1_Zfp128_1/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGTACGTCTG---
TTNGGGTACGCCNNANN
 A C G T A C G T A C G T A C G T A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T
G A C T C A G T C T G A T C A G A T C G A C T G A C G T C G T A A G T C C T A G G A T C G T A C G T C A G T C A C G T A C T A G T G C A

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GGTACGTCTG------
NNTNNTGTCTGGNNTNG
 A C G T A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GGTACGTCTG
CAGGTAAGTAT-
 A C G T A C G T A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G
T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GGTACGTCTG----
----GGTCTGGCAT
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGTACGTCTG-
---TWGTCTGV
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTACGTCTG
BGCACGTA--
 A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G
A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A A C G T A C G T

Gmeb1/MA0615.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GGTACGTCTG----
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C T G A C T G C G A T T C G A A G T C A C T G A C G T A G T C A C G T A C T G A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G