Information for 1-MCAGCTGBRN (Motif 1)

T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
Reverse Opposite:
T G A C A G T C T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G
p-value:1e-44
log p-value:-1.025e+02
Information Content per bp:1.691
Number of Target Sequences with motif242.0
Percentage of Target Sequences with motif28.67%
Number of Background Sequences with motif5266.2
Percentage of Background Sequences with motif10.95%
Average Position of motif in Targets52.0 +/- 26.3bp
Average Position of motif in Background49.6 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:1
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-MCAGCTGBRN-
NVCAGCTGBBNN
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:2
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--MCAGCTGBRN
NNVCAGCTGB--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--MCAGCTGBRN
NAACAGCTGT--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:4
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---MCAGCTGBRN
VNAVCAGCTGGC-
A C G T A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--MCAGCTGBRN
NNACAGCTGC--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-MCAGCTGBRN
ANCAGCTG---
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.90
Offset:-2
Orientation:forward strand
Alignment:--MCAGCTGBRN
NAHCAGCTGD--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.90
Offset:-2
Orientation:reverse strand
Alignment:--MCAGCTGBRN
CAGCAGCTGN--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--MCAGCTGBRN
NAACAGCTGG--
A C G T A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:10
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-MCAGCTGBRN
RCCATMTGTT-
A C G T T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G T C A G A C T G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T