Information for 25-GCCACGTGGA (Motif 39)

A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
Reverse Opposite:
G A C T A G T C A T G C G T C A T A G C A C T G A C G T A C T G A C T G T A G C
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.860
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif8.4
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets49.9 +/- 22.8bp
Average Position of motif in Background56.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-GCCACGTGGA
NNCCACGTGG-
 A C G T A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-GCCACGTGGA
NNCCACGTGG-
 A C G T A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:3
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA
GCCACGTGT-
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T

Mycn/MA0104.3/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA
GCCACGTG--
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA
NCCACGTG--
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCCACGTGGA
GGTCACGTGA-
 A C G T A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA
GNCACGTG--
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA
GHCACGTG--
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GCCACGTGGA--
ACCACGTGGTNN
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A A C G T A C G T
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GCCACGTGGA
--CACGTGBN
 A C T G G T A C A G T C C G T A T A G C A C T G A C G T A T C G A C T G C G T A
A C G T A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A