Information for 23-CAGCMGCTGCAGC (Motif 37)

A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
Reverse Opposite:
C A T G A G T C A C G T A C T G A G T C T G C A A T C G A T G C A C G T A C T G A G T C A C G T A T C G
p-value:1e-8
log p-value:-2.012e+01
Information Content per bp:1.750
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.0 +/- 23.1bp
Average Position of motif in Background67.9 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0003.1_Ascl2_1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CAGCMGCTGCAGC--
CTCAGCAGCTGCTACTG
 A C G T A C G T A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAGCMGCTGCAGC
-AGCAGCTGCT--
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGCMGCTGCAGC
CAGCAGCTGN---
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CAGCMGCTGCAGC
-CGCAGCTGCG--
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGCMGCTGCAGC
NNAGCAGCTGCT--
 A C G T A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCMGCTGCAGC
-GACAGCTGCAG-
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCMGCTGCAGC
SNGCACCTGCHS-
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCMGCTGCAGC
-AACAGCTGCAG-
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGCMGCTGCAGC------
--NNNANTGCAGTGCNNTT
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CAGCMGCTGCAGC
-------CACAGN
 A T G C G T C A A C T G T A G C G T C A T A C G T A G C A C G T C T A G A G T C C G T A A C T G G A T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C