Information for 18-CTCTTTCGAGACT (Motif 27)

A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T
Reverse Opposite:
G C T A A C T G A C G T A G T C C G A T A T G C T A C G T G C A T C G A C G T A A C T G G T C A T A C G
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.685
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.4 +/- 23.4bp
Average Position of motif in Background20.2 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFX(?)/Promoter/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTCTTTCGAGACT
-TCTCGCGAGAAT
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T
A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.63
Offset:6
Orientation:reverse strand
Alignment:CTCTTTCGAGACT-
------CCAGACAG
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CTCTTTCGAGACT-
------BCAGACWA
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CTCTTTCGAGACT---
------CCAGACRSVB
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

SMAD3/MA0795.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CTCTTTCGAGACT
---TGTCTAGACG
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T
A C G T A C G T A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

ZBTB33/MA0527.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTCTTTCGAGACT--
CTCTCGCGAGATCTG
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTTCGAGACT-
GTTCTCGCGAGANCC
 A C G T A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCTTTCGAGACT-----
-CAAATCCAGACATCACA
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZBED1/MA0749.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CTCTTTCGAGACT--
--CTATCGCGACATA
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T A C G T A C G T
A C G T A C G T G T A C C G A T T C G A G A C T A G T C T C A G G A T C T A C G T C G A G A T C G C T A A C G T C T G A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTCTTTCGAGACT
---ATGCCAGACN
 A G T C A C G T T G A C C G A T A C G T A C G T A T G C T A C G G C T A T C A G C G T A A G T C C G A T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C