Information for 10-GACATGGCTGTAA (Motif 16)

A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
Reverse Opposite:
A C G T C A G T C G T A T A G C C G T A A C T G A T G C A T G C C G T A C G A T C A T G A C G T A T G C
p-value:1e-13
log p-value:-3.166e+01
Information Content per bp:1.694
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets37.1 +/- 18.5bp
Average Position of motif in Background42.7 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GACATGGCTGTAA
NNACTTGCCTT---
 A C G T A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GACATGGCTGTAA-----
-AGGACGCTGTAAAGGGA
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACATGGCTGTAA-----
-AAGACGCTGTAAAGCGA
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GACATGGCTGTAA-----
-AAGACGCTGTAAAGCGA
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:GACATGGCTGTAA
------GCTGTG-
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GACATGGCTGTAA
---TWGTCTGV--
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACATGGCTGTAA
-TAATGGCGGNC-
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GACATGGCTGTAA-
------GCTGTCAA
 A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GACATGGCTGTAA
CAAGATGGCGGC--
 A C G T A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GACATGGCTGTAA
GTCATGCHTGRCTGS--
 A C G T A C G T A C G T A C G T A T C G T C G A G A T C C G T A A C G T A T C G T A C G A G T C C G A T A C T G C G A T G T C A C G T A
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T