Information for 5-AAACCACCACTGA (Motif 9)

C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
Reverse Opposite:
A C G T A G T C C G T A A C T G A C G T A C T G A T C G A C G T A C T G C T A G A C G T A C G T C G A T
p-value:1e-9
log p-value:-2.156e+01
Information Content per bp:1.868
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.8 +/- 28.9bp
Average Position of motif in Background70.6 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACCACCACTGA
AAACCACANN---
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAACCACCACTGA-
-----ACCACTTAA
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAACCACCACTGA
AAACCACAGC---
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAACCACCACTGA-
----AAGCACTTAA
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAACCACCACTGA
NAAACCACAG----
 A C G T C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAACCACCACTGA-
-----ACCACTTAA
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAACCACCACTGA-----
-CATAACCACTTAACAAC
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAACCACCACTGA
CATAAGACCACCATTAC
 A C G T A C G T A C G T A C G T C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AAACCACCACTGA-
----MRSCACTYAA
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAACCACCACTGA
AAACCGCAA----
 C G T A G T C A C G T A A G T C A G T C C G T A A T G C G T A C C G T A A G T C A C G T C T A G C G T A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T