Information for 4-CAGCASCTTGGAC (Motif 7)

A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
Reverse Opposite:
T A C G G C A T A T G C A T G C G T C A C T G A A C T G A T C G C G A T A C T G G T A C C G A T A C T G
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.732
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif119.0
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets53.6 +/- 23.3bp
Average Position of motif in Background51.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CAGCASCTTGGAC------
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTTGGAC------
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTTGGAC
AGCAGCTGCT-----
 A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTTGGAC
AGCAGCTGCTNN---
 A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CAGCASCTTGGAC
NCAGCTGCTG----
 A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CAGCASCTTGGAC
NGTCAGCANTTT----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAGCASCTTGGAC
GTCAGCANNTN----
 A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGCASCTTGGAC
CAGCTGNT-----
 A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCASCTTGGAC
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CAGCASCTTGGAC
CAGCC--------
 A G T C C G T A A C T G A G T C G C T A A T G C A G T C G A C T A C G T A T C G A T C G C G T A A T G C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T