Information for 3-GAABGAVACTGDTTGG (Motif 4)

A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
Reverse Opposite:
T A G C A G T C C G T A C G T A G C T A A G T C C G T A A T C G A C G T A T C G A C G T A G T C T C G A A C G T A C G T A G T C
p-value:1e-11
log p-value:-2.704e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.0 +/- 20.2bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:GAABGAVACTGDTTGG-------
--------CTGATTGGTCNATTT
 A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GAABGAVACTGDTTGG----
--AGAGTGCTGATTGGTCCA
 A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.51
Offset:8
Orientation:reverse strand
Alignment:GAABGAVACTGDTTGG--
--------CCGATTGGCT
 A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAABGAVACTGDTTGG
CTGATCGAAACCAAAGT-
 A C G T A C G T A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:5
Score:0.49
Offset:-3
Orientation:forward strand
Alignment:---GAABGAVACTGDTTGG
GAGAACCGAAACTG-----
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.49
Offset:8
Orientation:reverse strand
Alignment:GAABGAVACTGDTTGG
--------TTGATTGN
 A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

TEAD1/MA0090.2/Jaspar

Match Rank:7
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GAABGAVACTGDTTGG
NTGGAATGTG---------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---GAABGAVACTGDTTGG
NTGGAATGTN---------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GAABGAVACTGDTTGG
CAAAATCGAAACTAA----
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.48
Offset:9
Orientation:reverse strand
Alignment:GAABGAVACTGDTTGG-----
---------TGATTGGCTANN
 A C T G C G T A C G T A A C G T A C T G G T C A T A G C G T C A A T G C C G A T C T A G C A G T C G A T A C G T A C T G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T