Information for 6-GAAGSCCGVC (Motif 24)

A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
Reverse Opposite:
A T C G A T G C T A G C A C T G A T C G T A C G A G T C C A G T A C G T A T G C
p-value:1e-6
log p-value:-1.539e+01
Information Content per bp:1.663
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif12.74%
Number of Background Sequences with motif3304.5
Percentage of Background Sequences with motif6.77%
Average Position of motif in Targets46.0 +/- 24.3bp
Average Position of motif in Background49.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GAAGSCCGVC
NGAAGC-----
 A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GAAGSCCGVC
NTCAAGGTCA--
 A C G T A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAAGSCCGVC
CAAGGHCANV
 A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GAAGSCCGVC
AAGTTCAAGGTCAGC
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GAAGSCCGVC
BTCAAGGTCA--
 A C G T A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GAAGSCCGVC
--AGGCCTAG
 A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAAGSCCGVC
--AGGCCTNG
 A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GAAGSCCGVC
TCAAGGTCAT-
 A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T

KLF14/MA0740.1/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GAAGSCCGVC-
GGCCACGCCCCCTT
 A C G T A C G T A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C A C G T
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAGSCCGVC
TCAAGGTCAN-
 A C G T A T C G C G T A G T C A A C T G A T G C T A G C A G T C A T C G T A C G A T G C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T