Information for 3-AGAGAGCCTG (Motif 13)

C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G C T A G A T G C C G A T A G T C A G C T G T A C C G A T
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.832
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif4.01%
Number of Background Sequences with motif411.1
Percentage of Background Sequences with motif0.84%
Average Position of motif in Targets63.3 +/- 23.4bp
Average Position of motif in Background51.4 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.60
Offset:-9
Orientation:forward strand
Alignment:---------AGAGAGCCTG-
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAGAGCCTG
---CAGCC--
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAGAGCCTG-----
GGNGCGNCTGTTNNN
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:AGAGAGCCTG--
--ACATCCTGNT
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAGAGCCTG---
---GAGSCCGAGC
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGAGAGCCTG
AGCGCGCC--
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAGAGCCTG-
---TWGTCTGV
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.57
Offset:6
Orientation:forward strand
Alignment:AGAGAGCCTG--
------GCTGTG
 C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGCCTG--
TCAGNGAGCGTGAC
 A C G T A C G T C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G A C G T A C G T
A C G T T A G C T C G A A T C G T A C G T C A G C T G A A T C G A G T C C T A G G A C T C T A G C T G A T G A C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGAGAGCCTG
GRTGMTRGAGCC--
 A C G T A C G T A C G T A C G T C G T A C A T G T C G A T C A G C G T A A T C G A G T C A G T C A G C T A C T G
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C A C G T A C G T