Information for 4-CATGGATTAAGAGCTG (Motif 7)

A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
Reverse Opposite:
A G T C C G T A A C T G T G A C C G A T T A G C G C A T C G A T G T C A C G T A A G C T G T A C A G T C C G T A A C G T A C T G
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.713
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.6 +/- 29.1bp
Average Position of motif in Background59.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)3.2
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
-VRGGATTARN-----
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
--NGGATTAA------
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGGATTAAGAGCTG
TTGCCCGGATTAGG-----
 A C G T A C G T A C G T A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
--GGGATTAA------
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
--GGGATTANN-----
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
---GGATTAGC-----
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
--CGGATTAN------
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PH0035.1_Gsc/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CATGGATTAAGAGCTG
NNAAGGGATTAACGANT-
 A C G T A C G T A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T C G T A G T C A C T G A T A C G C T A G C T A G G T C A A C G T A G C T C G T A C T G A A G T C C A T G C G T A A G C T C G A T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:9
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CATGGATTAAGAGCTG
--RGGATTAR------
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CATGGATTAAGAGCTG
-NNGGATTAGN-----
 A G T C G T C A G A C T C T A G A C T G C T G A C G A T A C G T C G T A C G T A A C T G C G T A A C T G G T A C C G A T C T A G
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T