Information for 5-CCCCTTCCGAGVG (Motif 6)

A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
Reverse Opposite:
G T A C A G T C A G T C A G C T A G T C A T C G A C T G C G T A C G T A A C T G A C T G A C T G A C T G
p-value:1e-13
log p-value:-3.203e+01
Information Content per bp:1.846
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 29.7bp
Average Position of motif in Background69.8 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gabpa/MA0062.2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTCCGAGVG
NCCACTTCCGG---
 A C G T A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

ELK4/MA0076.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CCCCTTCCGAGVG
CCACTTCCGGC--
 A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C A C G T A C G T

ETV6/MA0645.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CCCCTTCCGAGVG
-CACTTCCGCT--
 A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTTCCGAGVG
CCCCCTGCTGTG--
 A C G T A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

ELF4/MA0641.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCCCTTCCGAGVG
-CACTTCCGGGTT
 A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A C G T G A T C T C G A A G T C C A G T G A C T G T A C A G T C A C T G A T C G C A T G C G A T G C A T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCCTTCCGAGVG
CCCCCCCC-----
 A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTTCCGAGVG
TTCCCCCTAC------
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ELF1/MA0473.2/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CCCCTTCCGAGVG
-NACTTCCGGGTT
 A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A C G T A G T C C T G A G A T C C G A T A G C T A G T C A G T C A C T G A T C G C A T G C G A T G C A T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CCCCTTCCGAGVG
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCCCTTCCGAGVG
GACCCCCCGCTGTGC-
 A C G T A C G T A C G T A G T C A G T C G T A C A G T C A C G T C G A T A G T C A T G C A C T G C T G A A C T G T A C G C A T G
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C A C G T