Information for 5-CAGCTGCAGA (Motif 5)

A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
Reverse Opposite:
G C A T G A T C C G A T A C T G A G T C C T G A A C T G A G T C C G A T C T A G
p-value:1e-13
log p-value:-3.217e+01
Information Content per bp:1.864
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif364.7
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets41.7 +/- 25.8bp
Average Position of motif in Background52.6 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myog/MA0500.1/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGA
GACAGCTGCAG-
 A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:2
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGA
AACAGCTGCAG-
 A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGCAGA
NCAGCTGCTG-
 A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGCAGA
NNACAGCTGC---
 A C G T A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGA
AGCAGCTGCTNN
 A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.80
Offset:-5
Orientation:forward strand
Alignment:-----CAGCTGCAGA--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTGCAGA
NGNGACAGCTGCN--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGA
AGCAGCTGCT--
 A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGCAGA
CGCAGCTGCG--
 A C G T A C G T A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.79
Offset:0
Orientation:reverse strand
Alignment:CAGCTGCAGA
CAGCTGNT--
 A G T C C G T A T C A G G T A C A G C T A C T G G T A C C G T A C T A G C G T A
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T