Information for 2-TTTGTGGTTT (Motif 3)

A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
Reverse Opposite:
G C T A G T C A T G C A G T A C T G A C C T G A A T G C G C T A C T G A T G C A
p-value:1e-27
log p-value:-6.334e+01
Information Content per bp:1.684
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif20.26%
Number of Background Sequences with motif3964.0
Percentage of Background Sequences with motif8.19%
Average Position of motif in Targets48.4 +/- 25.8bp
Average Position of motif in Background49.5 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:TTTGTGGTTT
NNTGTGGTTT
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:TTTGTGGTTT-
-CTGTGGTTTN
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-TTTGTGGTTT
GTCTGTGGTTT
 A C G T A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:TTTGTGGTTT
TTTGCGGTTT
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.89
Offset:0
Orientation:forward strand
Alignment:TTTGTGGTTT
GCTGTGGTTT
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTGGTTT-
NNHTGTGGTTWN
 A C G T A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:TTTGTGGTTT
-TTGCGGTTT
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:TTTGTGGTTT---
--TGTGGATTNNN
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TTTGTGGTTT--
NNTGTGGATTSS
 A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T A C G T A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PB0122.1_Foxk1_2/Jaspar

Match Rank:10
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TTTGTGGTTT-
NNNTGTTGTTGTTNG
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T T A C G G A C T A C T G C A T G A C G T A C G T C G A T A C G T
C T G A C A T G C T A G G C A T C T A G G C A T A C G T C T A G A G C T A C G T C T A G G A C T C A G T C G A T C A T G