Information for 13-CTCTAGCCAG (Motif 18)

A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A T C G A G T C A C G T C G T A A C T G C G T A C T A G
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.914
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif36.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.7 +/- 24.6bp
Average Position of motif in Background47.9 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTCTAGCCAG
CGTCTAGACA-
 A C G T A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G
G A T C C T A G C G A T T A G C A G C T T G C A A T C G G T C A G A T C G C T A A C G T

GFX(?)/Promoter/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCTAGCCAG-
ATTCTCGCGAGA
 A C G T A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTCTAGCCAG----
GTTCTCGCGAGANCC
 A C G T A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T A C G T A C G T A C G T
T A C G G A C T G A C T T G A C A G C T A G T C C A T G G T A C A C T G T C G A A C T G T C G A A C G T A G T C A T G C

ZBTB33/MA0527.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCTAGCCAG-----
CTCTCGCGAGATCTG
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G T C A G C T T G A C G A C T A G T C C T A G G A T C A C T G T C G A A C T G T C G A A G C T A G T C A G C T A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCTAGCCAG
AGGTCTCTAACC--
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CTCTAGCCAG---
---ATGCCAGACN
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTCTAGCCAG---
-ACTAGCCAATCA
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CTCTAGCCAG
--BCAGACWA
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTCTAGCCAG
----TGCCAA
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTCTAGCCAG-
--CGTGCCAAG
 A G T C A C G T A G T C A C G T C G T A C T A G A T G C A T G C C G T A A C T G A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G