Information for 9-TATTAGCCAA (Motif 11)

A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A
Reverse Opposite:
G A C T C A G T T C A G A T C G A G T C A G C T C T G A G T C A G A C T T G C A
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.718
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.47%
Number of Background Sequences with motif176.6
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets44.4 +/- 23.0bp
Average Position of motif in Background50.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TATTAGCCAA---
-ACTAGCCAATCA
 A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T A C G T A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0081.1_Tcf1_1/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TATTAGCCAA---
ACTTAGTTAACTAAAAA
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T A C G T A C G T
T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TATTAGCCAA--
NNNNCTGTTAACNNTNN
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T A C G T
A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TATTAGCCAA
----TGCCAA
 A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TATTAGCCAA---
CCTTAGTTAACTAAAAT
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T A C G T A C G T
G A T C A T G C A C G T A G C T T C A G A T C G G A C T G C A T C G T A C G T A A T G C G A C T C T G A T G C A C G T A C T G A A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TATTAGCCAA-
AGGTTAATTAGCTGAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T
T C G A T A C G C T A G A G C T G A C T G T C A C G T A C G A T A C G T C T G A T C A G G A T C A G C T A T C G C T G A C A G T

Barhl1/MA0877.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TATTAGCCAA
NNCAATTANN---
 A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

PH0049.1_Hoxa2/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TATTAGCCAA-
AAGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T
C T G A T G C A C T A G A T C G G A C T T G C A G T C A A C G T A C G T C T G A T A C G G A T C G A C T G T A C C G T A C G A T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TATTAGCCAA-
--CGTGCCAAG
 A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Hoxb5/MA0904.1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TATTAGCCAA-
ACGGTAATTAGCTCAT
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C G T A G C T C T G A T C A G A T G C A G T C G T C A C G T A A C G T
T G C A G T A C C T A G A C T G G A C T G T C A G C T A C A G T A C G T C T G A T A C G G A T C G C A T G T A C C G T A G C A T