Information for 17-AGGCACCTGTYCC (Motif 20)

G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
Reverse Opposite:
T A C G A C T G T C A G C T G A T G A C C T G A A C T G T C A G C G A T A T C G T G A C G T A C C A G T
p-value:1e-8
log p-value:-1.986e+01
Information Content per bp:1.717
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.00%
Number of Background Sequences with motif147.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets41.7 +/- 16.8bp
Average Position of motif in Background48.7 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Myod1/MA0499.1/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:forward strand
Alignment:AGGCACCTGTYCC-
-TGCAGCTGTCCCT
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C A C G T
A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-AGGCACCTGTYCC--
CNGACACCTGTTCNNN
 A C G T G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

ID4/MA0824.1/Jaspar

Match Rank:3
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGGCACCTGTYCC
-TACACCTGTC--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGCACCTGTYCC
NNGCAGCTGTT--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:AGGCACCTGTYCC
NNGCAGCTGTC--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.73
Offset:0
Orientation:forward strand
Alignment:AGGCACCTGTYCC
SNGCACCTGCHS-
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGGCACCTGTYCC
--NCACCTGTN--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGGCACCTGTYCC
-NVCAGCTGBBNN
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

TCF4/MA0830.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGGCACCTGTYCC
-CGCACCTGCT--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:AGGCACCTGTYCC
---CAGCTGTT--
 G T C A C A T G A C T G A T G C G C T A A G T C A G T C A G C T A C T G G A C T A G T C G T A C A G T C
A C G T A C G T A C G T A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T