Information for 2-VNVCAGCTGC (Motif 2)

T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C
Reverse Opposite:
T A C G A G T C C G T A A T C G A T G C A C G T A C T G A T G C T G A C A T C G
p-value:1e-28
log p-value:-6.641e+01
Information Content per bp:1.691
Number of Target Sequences with motif355.0
Percentage of Target Sequences with motif41.96%
Number of Background Sequences with motif11709.2
Percentage of Background Sequences with motif24.31%
Average Position of motif in Targets49.4 +/- 25.6bp
Average Position of motif in Background49.7 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VNVCAGCTGC
NNACAGCTGC
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:2
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:VNVCAGCTGC
NNVCAGCTGB
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:VNVCAGCTGC
NAACAGCTGT
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:VNVCAGCTGC---
-NVCAGCTGBBNN
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T A C G T A C G T
A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.95
Offset:2
Orientation:forward strand
Alignment:VNVCAGCTGC--
--NCAGCTGCTG
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.94
Offset:1
Orientation:forward strand
Alignment:VNVCAGCTGC--
-GACAGCTGCAG
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:7
Score:0.93
Offset:-1
Orientation:reverse strand
Alignment:-VNVCAGCTGC-
NNAGCAGCTGCT
 A C G T T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:VNVCAGCTGC--
-AACAGCTGCAG
 T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.92
Offset:-2
Orientation:reverse strand
Alignment:--VNVCAGCTGC-
NGNGACAGCTGCN
 A C G T A C G T T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--VNVCAGCTGC-----
CTCAGCAGCTGCTACTG
 A C G T A C G T T A G C A C T G T A C G A G T C C G T A T A C G T A G C A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G