Information for 12-VCCTVTTCTGAGVGCC (Motif 15)

T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
Reverse Opposite:
C T A G C T A G G T A C A C T G A G T C A C G T A T G C C G T A C T A G C T G A C G T A A G T C C G T A C A T G A T C G A C G T
p-value:1e-6
log p-value:-1.500e+01
Information Content per bp:1.776
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.2 +/- 19.3bp
Average Position of motif in Background29.8 +/- 2.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
--CTATTTTTGG----
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
-GCTATTTATAGC---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:VCCTVTTCTGAGVGCC
-GCTATTTTTAGC---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
-TCTATTTTTAGA---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
-TCTATTTATAGN---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T A C G T A C G T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
-KCTATTTTTRGH---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
TTCTATTTTTAGNNN-
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:VCCTVTTCTGAGVGCC
-GCTATTTTTGGM---
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:VCCTVTTCTGAGVGCC
----TTTCTNAGAAAN
 T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-VCCTVTTCTGAGVGCC
GTNTTGTTGTGANNT--
 A C G T T C G A A T G C G T A C A C G T T A C G A C G T A G C T A G T C A C G T A T C G C G T A A C T G T A G C A C T G A G T C A G T C
C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T A C G T A C G T