Information for 6-CTGACACATG (Motif 13)

T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
Reverse Opposite:
A G T C T C G A A G C T A C T G A C G T A T C G C G A T A T G C C G T A A C T G
p-value:1e-9
log p-value:-2.167e+01
Information Content per bp:1.843
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif81.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets37.5 +/- 23.4bp
Average Position of motif in Background49.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS1/MA0498.2/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CTGACACATG
TTGACAG---
 T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--CTGACACATG
ARNTGACA----
 A C G T A C G T T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTGACACATG
KTTCACACCT-
 A C G T T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTGACACATG
-TGACACCT-
 T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:5
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTGACACATG
VGCTGWCAVB--
 A C G T A C G T T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTGACACATG
-TGACTCA--
 T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:7
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTGACACATG---
-TGACACCTGTCA
 T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G A C G T A C G T A C G T
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

FOS/MA0476.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CTGACACATG
TGTGACTCATT
 A C G T T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G
C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

Hes2/MA0616.1/Jaspar

Match Rank:9
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTGACACATG-
TAACGACACGTGC
 A C G T A C G T T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G A C G T
A C G T C G T A C G T A T A G C A T C G C T G A G T A C C T G A G T A C C T A G A C G T C T A G G T A C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CTGACACATG--
--GTCACATGAY
 T G A C A C G T A T C G C G T A A T G C C G T A G T A C C T G A A G C T T C A G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C