Information for 2-CCAGCGTCCCCAGGHB (Motif 5)

A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
Reverse Opposite:
T C G A C A T G A G T C A G T C A C G T A C T G A C T G A T C G T C A G C T G A A T G C A C T G A T G C A C G T A C T G A C T G
p-value:1e-11
log p-value:-2.672e+01
Information Content per bp:1.827
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 27.9bp
Average Position of motif in Background54.7 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCAGCGTCCCCAGGHB
-CAACGTCCGCGG---
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCAGCGTCCCCAGGHB
TGCCTGCGYCMCCTT---
 A C G T A C G T A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:CCAGCGTCCCCAGGHB
------TGCCCAGNHW
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CCAGCGTCCCCAGGHB
----HTTTCCCASG--
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCAGCGTCCCCAGGHB-
-----GTCCCCAGGGGA
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCAGCGTCCCCAGGHB
------TCCCCA----
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCAGCGTCCCCAGGHB
---CTGTTGCTAGGS-
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CCAGCGTCCCCAGGHB
CCGTCTTCCCCCTCAC
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T
T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCAGCGTCCCCAGGHB-
--NNCGTTGCTATGGNN
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:CCAGCGTCCCCAGGHB-
--NCCGTTGCTANGNGN
 A G T C A G T C C G T A A T C G A G T C T A C G A G C T A G T C A T G C A G T C A G T C G T C A A C T G A C T G G A T C A C G T A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G