Information for 6-CATGCTCGGTGGT (Motif 22)

A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C C T G A A G T C A G T C C T A G C G T A A C T G A G T C G T C A A C G T A C T G
p-value:1e-6
log p-value:-1.393e+01
Information Content per bp:1.862
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.36%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.9 +/- 27.5bp
Average Position of motif in Background37.4 +/- 11.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB7C/MA0695.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:CATGCTCGGTGGT---
----NTCGGTGGTCGC
 A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTCGGTGGT
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTCGGTGGT
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CATGCTCGGTGGT---
----TTCGGTGGTCGC
 A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G T C C T A G C A T G C A G T A T C G A C T G C A G T G A T C A T C G G A T C

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CATGCTCGGTGGT----
-----TCGGTGGTCGCN
 A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATGCTCGGTGGT
CCTGCTGAGH---
 A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTCGGTGGT
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATGCTCGGTGGT
GTCACGCTCNCTGA-
 A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CATGCTCGGTGGT--
---CGTGGGTGGTCC
 A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CATGCTCGGTGGT
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C G T C A A C G T A C T G A G T C A C G T A G T C C T A G A C T G A G C T A C T G A C T G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T