Information for 3-CHCAGTGGTCCAKGCT (Motif 9)

T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
Reverse Opposite:
C G T A A C T G A G T C G T C A A C G T A C T G A C T G C G T A A G T C G T A C C G T A A G T C C G A T A T C G C A G T A T C G
p-value:1e-8
log p-value:-1.951e+01
Information Content per bp:1.744
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.50%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.5 +/- 23.6bp
Average Position of motif in Background53.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CHCAGTGGTCCAKGCT
CAGTGTGGTCGC----
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CHCAGTGGTCCAKGCT
CGTGGGTGGTCC-----
 A C G T T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CHCAGTGGTCCAKGCT
-AAGGKGRCGCAGGCA
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CHCAGTGGTCCAKGCT
NNANTGGTGGTCTTNNN-
 A C G T A C G T T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T

ZBTB7A/MA0750.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CHCAGTGGTCCAKGCT
-TCGGTGGTCGCN---
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A C G T A C G T G T A C C A T G A C T G C A G T T A C G C T A G C A G T A G T C A T C G A G T C T G A C A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CHCAGTGGTCCAKGCT
CGAACAGTGCTCACTAT-
 A C G T A C G T T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T A C G T

ZBTB7C/MA0695.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CHCAGTGGTCCAKGCT
NTCGGTGGTCGC----
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CHCAGTGGTCCAKGCT
--CNGTCCTCCC----
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CHCAGTGGTCCAKGCT
----GTGGAT------
 T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CHCAGTGGTCCAKGCT
GGCGAGGGGTCAAGGGC
 A C G T T A G C G T A C A T G C G C T A A C T G G C A T A C T G A C T G C G A T G T A C A G T C G T C A C A G T A C T G A G T C G A C T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C