Information for 5-CCGSMRCRAG (Motif 13)

A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
Reverse Opposite:
G T A C C G A T A G C T A C T G G A C T A C T G A T C G A G T C A C T G A C T G
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.704
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.78%
Number of Background Sequences with motif809.4
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets43.3 +/- 23.9bp
Average Position of motif in Background50.8 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2/MA0511.2/Jaspar

Match Rank:1
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CCGSMRCRAG
AAACCGCAA----
 A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCGSMRCRAG
AAACCGCAAA---
 A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCGSMRCRAG
TTTTCCCGCCAAAA-
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:4
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CCGSMRCRAG
TTTCCCGCCMAV--
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGSMRCRAG--
ATCCCCGCCCCTAAAA
 A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G A C G T A C G T
G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

PB0202.1_Zfp410_2/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGSMRCRAG--
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CCGSMRCRAG-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CCGSMRCRAG
NRYTTCCGGH-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----CCGSMRCRAG
NRYTTCCGGY-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T A C G T A C G T

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----CCGSMRCRAG
NACTTCCGGT-----
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C C T A G A T G C G T A C C T G A G T A C C T G A C G T A C A T G
G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T A C G T A C G T A C G T A C G T A C G T