Information for 4-CAGCAGCTCT (Motif 11)

A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
Reverse Opposite:
G C T A C A T G C G T A A T C G G T A C C A G T C T A G T G A C G A C T T A C G
p-value:1e-8
log p-value:-1.923e+01
Information Content per bp:1.692
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif7.30%
Number of Background Sequences with motif1461.5
Percentage of Background Sequences with motif3.12%
Average Position of motif in Targets51.5 +/- 27.0bp
Average Position of motif in Background49.8 +/- 34.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCTCT
CAGCTGNT--
 A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CAGCAGCTCT
NCAGCTGCTG-
 A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCTCT
AGCAGCTGCTNN
 A C G T A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CAGCAGCTCT--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CAGCAGCTCT
AGCAGCTGCT--
 A C G T A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MSC/MA0665.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CAGCAGCTCT-
-AACAGCTGTT
 A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T A C G T
A C G T T C G A T C G A G T A C C G T A A T C G A T G C A C G T T A C G A C G T G A C T

Tcf21/MA0832.1/Jaspar

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAGCTCT---
NCAACAGCTGTTGC
 A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T A C G T A C G T A C G T
T C G A A G T C C T G A T G C A A G T C C G T A T A C G G T A C A C G T A C T G A C G T G A C T C T A G A G T C

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGCAGCTCT
ACAGCTGTTV-
 A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCAGCTCT-
TGCAGCTGTCCCT
 A C G T A C G T A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CAGCAGCTCT
CAGCTGTT--
 A T G C C T G A A C T G A G T C G T C A A C T G T A G C G C A T G T A C C G A T
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T