Information for 2-CAGCGABTCCTCA (Motif 4)

A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A
Reverse Opposite:
C G A T A T C G G T C A A C T G A C T G C G T A T A C G A G C T A G T C A T C G A G T C A C G T A C T G
p-value:1e-13
log p-value:-3.035e+01
Information Content per bp:1.835
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.5 +/- 21.8bp
Average Position of motif in Background49.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGCGABTCCTCA---
TACGAGACTCCTCTAAC
 A C G T A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

SPIB/MA0081.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CAGCGABTCCTCA
------TTCCTCT
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:reverse strand
Alignment:CAGCGABTCCTCA
-------TCCCCA
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A

NRF1/MA0506.1/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGCGABTCCTCA
--GCGCCTGCGCA
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A
A C G T A C G T T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CAGCGABTCCTCA--
---SSAATCCACANN
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T A C G T
A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGCGABTCCTCA
AGGGGATTCCCCT
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGABTCCTCA--
NNGGCGACACCTCNNN
 A C G T A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T A C G T
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGCGABTCCTCA-
--GCGCATGCGCAG
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T
A C G T A C G T T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF(NRF)/Promoter/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGCGABTCCTCA-
--GCGCATGCGCAC
 A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T
A C G T A C G T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGCGABTCCTCA-
GNNAGCTAATCCCCCN
 A C G T A C G T A G T C G T C A A C T G A T G C C T A G C T G A A T G C A C G T A G T C A G T C A C G T A T G C C G T A A C G T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T