Information for 1-AACAGCAACC (Motif 3)

T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
Reverse Opposite:
C T A G C T A G A C G T A G C T A T C G A G T C G A C T A T C G A G C T A G C T
p-value:1e-14
log p-value:-3.402e+01
Information Content per bp:1.646
Number of Target Sequences with motif90.0
Percentage of Target Sequences with motif10.04%
Number of Background Sequences with motif1844.8
Percentage of Background Sequences with motif3.94%
Average Position of motif in Targets54.2 +/- 26.5bp
Average Position of motif in Background49.7 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AACAGCAACC
NACAGGAAAT
 T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

PB0033.1_Irf3_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AACAGCAACC-
GAGAACCGAAACTG
 A C G T A C G T A C G T T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C A C G T
A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AACAGCAACC-
-ACTGAAACCA
 T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACAGCAACC--
ATAAACCGAAACCAA
 A C G T A C G T A C G T T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AACAGCAACC-
-ACAGGAAGTG
 T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C A C G T
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AACAGCAACC
GAAAMTGAAACT
 A C G T A C G T T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AACAGCAACC
AACAGGAAGT
 T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AACAGCAACC
AAACCGCAA--
 A C G T T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AACAGCAACC
-AGAGGAA--
 T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACAGCAACC
GAAASYGAAASY
 A C G T A C G T T C G A T C G A T A G C C T G A C T A G T A G C T C G A C G T A G A T C A G T C
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T