Information for 14-CSAWGTKRCA (Motif 19)

G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
Reverse Opposite:
G A C T A T C G A G T C T G C A G T C A T G A C G C A T A G C T A T C G C A T G
p-value:1e-5
log p-value:-1.298e+01
Information Content per bp:1.614
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.17%
Number of Background Sequences with motif538.6
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets47.0 +/- 29.0bp
Average Position of motif in Background49.5 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF2/MA0526.1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CSAWGTKRCA
GTCATGTGACC
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CSAWGTKRCA
KCCACGTGAC-
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CSAWGTKRCA--
--AGGTGTGAAM
 G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CSAWGTKRCA-
-NATGTTGCAA
 G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A A C G T
A C G T C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A

USF1/MA0093.2/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CSAWGTKRCA
GCCACGTGACC
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CSAWGTKRCA
RTCATGTGAC-
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CSAWGTKRCA
ACCACGTGAC-
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CSAWGTKRCA
NTCAAGTGGN-
 A C G T G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CSAWGTKRCA
CCATGTGCTT
 G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
T G A C A G T C C G T A A G C T A C T G A C G T A C T G A T G C G A C T A G C T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CSAWGTKRCA
TCACGTGACC
 G T A C T A G C T C G A C G T A A C T G C A G T A C G T T C A G A T G C C T G A
A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C