Information for 6-GCTGTGGTTT (Motif 9)

C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
Reverse Opposite:
C G T A C G T A C T G A A G T C G T A C C G T A T A G C C G T A A T C G A G T C
p-value:1e-11
log p-value:-2.553e+01
Information Content per bp:1.754
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif229.5
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets55.5 +/- 28.5bp
Average Position of motif in Background49.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GCTGTGGTTT
GCTGTGGTTT
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GCTGTGGTTT
NNTGTGGTTT
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GCTGTGGTTT-
-CTGTGGTTTN
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:forward strand
Alignment:-GCTGTGGTTT
GTCTGTGGTTT
 A C G T C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGGTTT-
NNHTGTGGTTWN
 A C G T C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Gfi1b/MA0483.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCTGTGGTTT
TGCTGTGATTT
 A C G T C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCTGTGGTTT
-TTGCGGTTT
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GCTGTGGTTT
TTTGCGGTTT
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCTGTGGTTT---
--TGTGGATTNNN
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCTGTGGTTT
GCAGTGATTT
 C T A G T A G C A C G T A T C G G C A T A C T G A C T G A G C T C G A T C G A T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T