Information for 2-CGCCMYCTDCTGG (Motif 3)

A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
Reverse Opposite:
A G T C T A G C C T G A A T C G G A C T C G T A C T A G T C A G A C T G A C T G A T C G A G T C C T A G
p-value:1e-18
log p-value:-4.267e+01
Information Content per bp:1.755
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.33%
Number of Background Sequences with motif498.5
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets52.4 +/- 22.8bp
Average Position of motif in Background51.5 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-6
Orientation:forward strand
Alignment:------CGCCMYCTDCTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:reverse strand
Alignment:---CGCCMYCTDCTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.84
Offset:-4
Orientation:forward strand
Alignment:----CGCCMYCTDCTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----CGCCMYCTDCTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

KLF14/MA0740.1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----CGCCMYCTDCTGG
GGCCACGCCCCCTT----
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
C A T G T C A G G T A C A G T C T G C A G A T C T C A G A T G C A G T C A G T C G T A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGCCMYCTDCTGG
GCCGCCATCTTG---
 A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CGCCMYCTDCTGG
-GCCATCTGTT--
 A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCMYCTDCTGG--
GGCCYCCTGCTGDGH
 A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CGCCMYCTDCTGG
GCCCCGCCCCCTCCC--
 A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CGCCMYCTDCTGG
ATGCCACGCCCCTTTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G T A G C A G T C G T A C A G T C A G T C A C G T C T G A T A G C G A C T A T C G T C A G
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T