Information for 11-CAGCGCGCCGCTC (Motif 12)

A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C
Reverse Opposite:
A C T G G T C A A T C G A G T C A T C G A C T G A G T C A C T G A G T C A C T G G T A C A C G T A C T G
p-value:1e-10
log p-value:-2.381e+01
Information Content per bp:1.904
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.0 +/- 19.2bp
Average Position of motif in Background73.9 +/- 14.7bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAGCGCGCCGCTC
-AGCGCGCC----
 A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C
A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCGCCGCTC-
NTCGCGCGCCTTNNN
 A C G T A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAGCGCGCCGCTC--
TACGCCCCGCCACTCTG
 A C G T A C G T A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCGCGCCGCTC--
-GCCGCGCAGTGCGT
 A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T A C G T
A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGCGCGCCGCTC-
ANCGCGCGCCCTTNN
 A C G T A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

PB0095.1_Zfp161_1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----CAGCGCGCCGCTC
NCANGCGCGCGCGCCA-
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGCGCCGCTC
DCTCAGCAGG------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CAGCGCGCCGCTC--
---GGCCCCGCCCCC
 A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAGCGCGCCGCTC---
----GCTCCGCCCMCY
 A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CAGCGCGCCGCTC
CAGCC--------
 A G T C C G T A A C T G A G T C A C T G A G T C A C T G A G T C A T G C C T A G A T G C A C G T A G T C
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T