Information for 8-CGATTGGTCG (Motif 10)

G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
Reverse Opposite:
T G A C T A C G T G C A T A G C A T G C G T C A C T G A A G C T T A G C C T A G
p-value:1e-11
log p-value:-2.540e+01
Information Content per bp:1.689
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.00%
Number of Background Sequences with motif477.1
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets41.3 +/- 27.8bp
Average Position of motif in Background49.5 +/- 33.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.77
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGTCG
CCGATTGGCT-
 A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGTCG----
CTGATTGGTCNATTT
 A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G A C G T A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CGATTGGTCG--
TGATTGGCTANN
 G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G A C G T A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.71
Offset:-7
Orientation:forward strand
Alignment:-------CGATTGGTCG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

SOX9/MA0077.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CGATTGGTCG
CCATTGTTC-
 G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGATTGGTCG
CCATTGTTYB
 G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGATTGGTCG
TTGATTGN---
 A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGATTGGTCG
NCCATTGTTC-
 A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CGATTGGTCG--
NNANTGATTGATNNNN
 A C G T A C G T A C G T A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGATTGGTCG----
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T G A T C A T C G C T G A G A C T A C G T A T C G A T C G A C G T A T G C A C T G A C G T A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A