Information for 11-CGTGCATGCA (Motif 17)

G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C C T G A A C G T A C T G A G T C C G T A A G T C C T A G
p-value:1e-8
log p-value:-1.866e+01
Information Content per bp:1.875
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif46.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets39.7 +/- 22.8bp
Average Position of motif in Background44.4 +/- 41.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGTGCATGCA-
-TTGCGTGCVA
 G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T
A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

NRF(NRF)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CGTGCATGCA-
GTGCGCATGCGC
 A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGCATGCA---
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGTGCATGCA-
CTGCGCATGCGC
 A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGTGCATGCA
RTACGTGC-----
 A C G T A C G T A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTGCATGCA--
-GTACCCGCATN
 G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CGTGCATGCA-
TGCGCAGGCGC
 G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A A C G T
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CGTGCATGCA
GGACGTGC-----
 A C G T A C G T A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGTGCATGCA
----CACGCA
 G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGTGCATGCA
TACGTGCV----
 A C G T A C G T G A T C C T A G A C G T A C T G A G T C G T C A A G C T A C T G A G T C C G T A
A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C A C G T A C G T A C G T A C G T