Information for 11-GGAGCAGGTGCCG (Motif 16)

A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
Reverse Opposite:
G T A C A C T G A C T G A G T C C G T A A G T C A G T C A C G T A T C G A G T C A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.046e+01
Information Content per bp:1.908
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif6.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.7 +/- 17.9bp
Average Position of motif in Background29.4 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
-SDGCAGGTGCNS
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GGAGCAGGTGCCG
--AACAGGTGT--
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GGAGCAGGTGCCG--
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

TCF4/MA0830.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
--NNCAGGTGCG-
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T

TCF3/MA0522.2/Jaspar

Match Rank:5
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
--NNCAGGTGTN-
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
--NNCAGGTGNN-
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
--GACAGGTGTN-
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAGGTGCCG
NGNGACAGCTGCN-
 A C G T A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGAGCAGGTGCCG---
ATCCACAGGTGCGAAAA
 A C G T A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:10
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GGAGCAGGTGCCG
--CGCAGCTGCG-
 A C T G A C T G C G T A A C T G A T G C C G T A A C T G A C T G A C G T A C T G A G T C T A G C A C T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T