p-value: | 1e-7 |
log p-value: | -1.689e+01 |
Information Content per bp: | 1.700 |
Number of Target Sequences with motif | 28.0 |
Percentage of Target Sequences with motif | 3.29% |
Number of Background Sequences with motif | 452.1 |
Percentage of Background Sequences with motif | 0.97% |
Average Position of motif in Targets | 55.7 +/- 20.7bp |
Average Position of motif in Background | 48.2 +/- 34.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.6 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0028.1_Hbp1_1/Jaspar
Match Rank: | 1 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCATGCATG-- ACTATGAATGAATGAT |
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PB0170.1_Sox17_2/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGCATGCATG----- NTTNTATGAATGTGNNC |
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Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCATGCATG TTGCGTGCVA- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TGCATGCATG- NNTNTCATGAATGT |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 5 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCATGCATG TGCGTG---- |
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Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer
Match Rank: | 6 |
Score: | 0.57 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCATGCATG- CCATTGTATGCAAAT |
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GCM1/MA0646.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGCATGCATG GTACCCGCATN |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 8 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGCATGCATG- GTCATGCHTGRCTGS |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TGCATGCATG--- ---ATGMATATDC |
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Pax6/MA0069.1/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGCATGCATG---- TTCACGCATGAGTT |
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