Information for 5-TGCCATGTTCGCT (Motif 7)

A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
Reverse Opposite:
C G T A A C T G A T G C C T A G C G T A C T G A A G T C C G T A A C G T A T C G A C T G A G T C C G T A
p-value:1e-11
log p-value:-2.666e+01
Information Content per bp:1.929
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.8 +/- 24.6bp
Average Position of motif in Background61.2 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TGCCATGTTCGCT
GCNGCCATCTTG---
 A C G T A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TGCCATGTTCGCT
GCCGCCATCTTG---
 A C G T A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCATGTTCGCT
TTGCCAAG------
 A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCCATGTTCGCT
GGTGCCAAGT-----
 A C G T A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCCATGTTCGCT
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.54
Offset:1
Orientation:forward strand
Alignment:TGCCATGTTCGCT--
-GTCACGCTCNCTGA
 A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGCCATGTTCGCT
TGTCANYT-----
 A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGCCATGTTCGCT
ATGCCACGTCATCA
 A C G T A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGCCATGTTCGCT
TGCCAA-------
 A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGCCATGTTCGCT--
-----TRTTTACTTW
 A C G T A C T G A G T C A T G C G T C A A C G T A C T G A G C T A C G T A G T C A T C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A