Information for 10-YACTTTCTMAGGG (Motif 19)

A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
Reverse Opposite:
A G T C G A T C A G T C C G A T A C G T C G T A T A C G G T C A T C G A C G T A A C T G A C G T C T A G
p-value:1e-7
log p-value:-1.712e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif10.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.4 +/- 16.7bp
Average Position of motif in Background44.4 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0004.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:YACTTTCTMAGGG------
--NTNNTTAAGTGGTTANN
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C A G T A C G T A T C G G C A T C G A T C T G A C T G A A C T G C G A T C T A G A T C G C G A T A G C T C G T A C G A T A C T G

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YACTTTCTMAGGG
CACTTCCTCT---
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T A C G T A C G T A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:YACTTTCTMAGGG--
------TTAAGTGGN
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.55
Offset:6
Orientation:forward strand
Alignment:YACTTTCTMAGGG-
------CTAATKGV
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T C T G A C G T A A C G T C A G T T C A G T G A C

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YACTTTCTMAGGG------
--NTNNTTAAGTGGNTNAN
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx3-1/MA0124.2/Jaspar

Match Rank:6
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:YACTTTCTMAGGG--
------TTAAGTGGT
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:YACTTTCTMAGGG
--CTTTGT-----
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---YACTTTCTMAGGG
MRSCACTYAA------
 A C G T A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:YACTTTCTMAGGG
TGCTGASTCAGC-
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:YACTTTCTMAGGG
GNCTATAAAAGG-
 A G T C C G T A A G T C A C G T A C G T A C G T A G T C A C G T G T C A C G T A A C T G C A T G C T A G
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T