Information for 12-GRRCAKGTGS (Motif 12)

C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G
Reverse Opposite:
A T G C T A G C G T C A T A G C T G C A G C A T A C T G G A C T G A C T G T A C
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.464
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif524.7
Percentage of Background Sequences with motif1.13%
Average Position of motif in Targets52.1 +/- 27.2bp
Average Position of motif in Background51.4 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:GRRCAKGTGS--
SDGCAGGTGCNS
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T A C G T
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0047.1_Myf6_1/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GRRCAKGTGS---
GAAGAACAGGTGTCCG
 A C G T A C G T A C G T C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T A C G T A C G T
T C A G T C G A C T G A A T C G T C G A C T G A A G T C C G T A A T C G A C T G G A C T A C T G A C G T A G T C G A T C A C T G

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GRRCAKGTGS
-AACAGGTGT
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G
A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Myod1/MA0499.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GRRCAKGTGS-
NGNGACAGCTGCN
 A C G T A C G T C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

ID4/MA0824.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GRRCAKGTGS-
-GACAGGTGTN
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T
A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

Tcf12/MA0521.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GRRCAKGTGS--
-AACAGCTGCAG
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GRRCAKGTGS--
-GACAGCTGCAG
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GRRCAKGTGS-
-NNCAGGTGNN
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GRRCAKGTGS-
-NNCAGGTGTN
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T
A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T

FIGLA/MA0820.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GRRCAKGTGS-
-AACAGGTGNT
 C A T G C T G A C T G A T G A C C G T A A C G T A T C G C A G T A T C G T A C G A C G T
A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T