Information for 5-RWTSAGMAMCMWGGMM (Motif 10)

T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
Reverse Opposite:
A C T G A C G T A G T C A G T C C G T A C A G T A C T G A C G T A G C T A C G T A G T C A C G T A T C G C G T A C G T A A G C T
p-value:1e-10
log p-value:-2.497e+01
Information Content per bp:1.772
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.0 +/- 22.6bp
Average Position of motif in Background46.0 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:RWTSAGMAMCMWGGMM------
-TTCAGCACCATGGACAGCGCC
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:RWTSAGMAMCMWGGMM------
--TCAGCACCATGGACAGCTCC
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---RWTSAGMAMCMWGGMM
CTGAGTCAGCAATTT----
 A C G T A C G T A C G T T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--RWTSAGMAMCMWGGMM
TGAGTCAGCA--------
 A C G T A C G T T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:RWTSAGMAMCMWGGMM
ATTGCGCAAC------
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:RWTSAGMAMCMWGGMM
-GTCAGCANNTN----
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:7
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:RWTSAGMAMCMWGGMM-
--NNNGTAACTANGNNA
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C A C G T
A C G T A C G T A C G T A T G C A T C G A C T G G A C T G T C A C G T A G T A C A G C T G C T A C A T G A T C G T A C G C A G T C G T A

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:RWTSAGMAMCMWGGMM
NGTCAGCANTTT----
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:forward strand
Alignment:RWTSAGMAMCMWGGMM--
------CAAGATGGCGGC
 T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NFYA/MA0060.2/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:reverse strand
Alignment:------RWTSAGMAMCMWGGMM
TGGACCAATCAGCACTCT----
 A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G A T A C G T A T G C C G T A A C T G G T C A C T G A G T C A A G T C G T A C C G A T A C T G A C T G G T C A G T A C
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T A C G T A C G T A C G T A C G T