Information for 2-YDCWGGGAVBTGTAGT (Motif 3)

A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T
Reverse Opposite:
G C T A A G T C A G C T T C G A A G T C T G C A T G A C A G T C A G C T G T A C G A T C G T A C C G T A T A C G G C T A T C A G
p-value:1e-22
log p-value:-5.207e+01
Information Content per bp:1.573
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif208.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets60.2 +/- 25.0bp
Average Position of motif in Background46.9 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.86
Offset:4
Orientation:reverse strand
Alignment:YDCWGGGAVBTGTAGT
----GGGAATTGTAGT
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T
A C G T A C G T A C G T A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---YDCWGGGAVBTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.81
Offset:-3
Orientation:reverse strand
Alignment:---YDCWGGGAVBTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:YDCWGGGAVBTGTAGT---
-------NNHTGTGGTTWN
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:8
Orientation:forward strand
Alignment:YDCWGGGAVBTGTAGT--
--------GCTGTGGTTT
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.60
Offset:9
Orientation:reverse strand
Alignment:YDCWGGGAVBTGTAGT---
---------CTGTGGTTTN
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:YDCWGGGAVBTGTAGT--
--------NNTGTGGTTT
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.56
Offset:7
Orientation:forward strand
Alignment:YDCWGGGAVBTGTAGT--
-------GTCTGTGGTTT
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PB0117.1_Eomes_2/Jaspar

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:YDCWGGGAVBTGTAGT---
---GCGGAGGTGTCGCCTC
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:YDCWGGGAVBTGTAGT--
---------TTGCGGTTT
 A G T C C G A T A T G C G C A T A C T G C A T G A C T G T C G A T C A G A C T G A C G T C T A G A G C T C T G A C T A G C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T