Information for 12-TGGAGAATAAGTA (Motif 9)

A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
Reverse Opposite:
A G C T C T G A A G T C A C G T A C G T C G T A A G C T A C G T G T A C A C G T A T G C A G T C C G T A
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.861
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 22.6bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU4F2/MA0683.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAATAAGTA--
ATGCATAATTAATGAG
 A C G T A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A A C G T A C G T
C T G A G A C T C T A G G T A C G C T A C G A T C G T A G C T A G C A T G C A T C T G A T C G A A C G T A C T G C T G A T C A G

POU4F1/MA0790.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAATAAGTA
ATGAATAATTAATG
 A C G T A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
T C G A G A C T C T A G G T C A G C T A C G A T C G T A C G T A C G A T C G A T C G T A T C G A G A C T C A T G

POU4F3/MA0791.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGGAGAATAAGTA--
ATGCATAATTAATGAG
 A C G T A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A A C G T A C G T
C T G A A G C T C A T G G T A C G C T A C G A T C G T A C G T A C G A T C G A T C G T A C T G A G A C T C A T G G T C A T C A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TGGAGAATAAGTA
-----AATAATT-
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

Nkx2-5/MA0063.1/Jaspar

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGGAGAATAAGTA
------TTAATTG
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G

NKX3-2/MA0122.2/Jaspar

Match Rank:6
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:TGGAGAATAAGTA--
------TTAAGTGGN
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A T C G A C A T G C G A T C T A G A T C G A G C T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGAGAATAAGTA
TGGAAAA------
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:8
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGAGAATAAGTA-
------TTAAGTGC
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A G C T A C A T G C G A T C T A G A T G C

Nkx3-1/MA0124.2/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:TGGAGAATAAGTA--
------TTAAGTGGT
 A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T G A C T G A A C T G C G A T T C A G A T C G A G C T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGGAGAATAAGTA
AATGGAAAAT-----
 A C G T A C G T A C G T A C T G A T C G C G T A A C T G G T C A C T G A A C G T C G T A C G T A C T A G A G C T C T G A
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T