Information for 2-VSCACGTGGNBSN (Motif 3)

T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
Reverse Opposite:
T A C G A T C G T G C A T C G A A T G C A G T C C T G A T A G C A C T G G A C T A C T G A T C G A G T C
p-value:1e-48
log p-value:-1.118e+02
Information Content per bp:1.576
Number of Target Sequences with motif124.0
Percentage of Target Sequences with motif13.95%
Number of Background Sequences with motif1243.7
Percentage of Background Sequences with motif2.73%
Average Position of motif in Targets48.9 +/- 24.3bp
Average Position of motif in Background51.4 +/- 34.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:VSCACGTGGNBSN
NCCACGTG-----
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-VSCACGTGGNBSN
NNCCACGTGG----
 A C G T T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G A C G T A C G T A C G T A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-VSCACGTGGNBSN
NNCCACGTGG----
 A C G T T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A C G T A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:4
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:VSCACGTGGNBSN
NNCACGTGGT---
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VSCACGTGGNBSN
ACCACGTGGTNN-
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:6
Score:0.96
Offset:0
Orientation:forward strand
Alignment:VSCACGTGGNBSN
NVCACGTG-----
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

MNT/MA0825.1/Jaspar

Match Rank:7
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:VSCACGTGGNBSN
NGCACGTGNT---
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:8
Score:0.95
Offset:2
Orientation:forward strand
Alignment:VSCACGTGGNBSN
--CACGTG-----
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:9
Score:0.95
Offset:0
Orientation:forward strand
Alignment:VSCACGTGGNBSN
GNCACGTG-----
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T

Id2/MA0617.1/Jaspar

Match Rank:10
Score:0.95
Offset:1
Orientation:forward strand
Alignment:VSCACGTGGNBSN
-GCACGTGA----
 T C A G T A G C G T A C C T G A T A G C A C T G A G C T A C T G A T C G A G C T A C G T T A G C A T C G
A C G T T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T A C G T A C G T