Information for 13-CGCATGCGCA (Motif 16)

T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
Reverse Opposite:
C G A T A C T G G T A C A T C G A G T C C T G A A C G T A C T G A T G C A T C G
p-value:1e-8
log p-value:-1.911e+01
Information Content per bp:1.857
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif219.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets38.9 +/- 27.0bp
Average Position of motif in Background49.7 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF(NRF)/Promoter/Homer

Match Rank:1
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAC
 A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A A C G T
A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C C T G A T A G C

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-CGCATGCGCA-
GCGCATGCGCAG
 A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.86
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
GCGCCTGCGCA
 A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGCATGCGCA
GGCACGCGTC
 T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CGCATGCGCA
--CACGCA--
 T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCATGCGCA--
CTACGCCCACGCACT
 A C G T A C G T A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
TBGCACGCAA-
 A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCATGCGCA
ACGCCCACGCA
 A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A

PB0044.1_Mtf1_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCA----
GGGCCGTGTGCAAAAA
 A C G T A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A A C G T A C G T A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

PB0147.1_Max_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGCATGCGCA--
GTGCCACGCGACTG
 A C G T A C G T T A G C A T C G A G T C C G T A A G C T A C T G A T G C A C T G T A G C C G T A A C G T A C G T
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G