Information for 5-AAGAAGAATT (Motif 9)

G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T
Reverse Opposite:
G T C A C G T A A G C T C G A T A G T C A C G T C G A T A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.283e+01
Information Content per bp:1.856
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif13.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets65.6 +/- 32.1bp
Average Position of motif in Background45.7 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0063.1_Sox13_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGAATT----
TTAAGAACAATAAATT
 A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGAAGAATT-
AAAGRGGAAGTG
 A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G

PB0062.1_Sox12_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---AAGAAGAATT-
NTTNAGAACAATTA
 A C G T A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0072.1_Sox5_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AAGAAGAATT----
TTTAGAACAATAAAAT
 A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0074.1_Sox8_1/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGAAGAATT-----
TNNAGAACAATANATNN
 A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0173.1_Sox21_2/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGAAGAATT----
NNNNNGAACAATTGANN
 A C G T A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AAGAAGAATT---
NNTNANAACAATTNNA
 A C G T A C G T A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGAAGAATT-----
ATAAACAATTAAACA
 G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A

PROX1/MA0794.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAGAAGAATT-
CAAGACGCCTTA
 A C G T G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T A C G T
A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGAAGAATT
-NGAAGC---
 G T C A C G T A C T A G C G T A G T C A A C T G C G T A C T G A C G A T A C G T
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T