Information for 3-GAACAGGCCY (Motif 5)

C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
Reverse Opposite:
C T G A A T C G A C T G A T G C A T G C C G A T A C T G A C G T A G C T G T A C
p-value:1e-11
log p-value:-2.568e+01
Information Content per bp:1.540
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.56%
Number of Background Sequences with motif554.1
Percentage of Background Sequences with motif1.17%
Average Position of motif in Targets54.4 +/- 27.3bp
Average Position of motif in Background50.4 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GAACAGGCCY
-CACAGN---
 C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----GAACAGGCCY
CCAGGAACAG----
 A C G T A C G T A C G T A C G T C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GAACAGGCCY---
AGCAACAGCCGCACC
 A C G T A C G T C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T A C G T A C G T A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GAACAGGCCY
NHAACBGYYV-
 A C G T C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GAACAGGCCY--
----AGGCCTNG
 C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:6
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GAACAGGCCY--
----AGGCCTAG
 C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----GAACAGGCCY--
NNATTGACAGGTGCTT
 A C G T A C G T A C G T A C G T C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T A C G T A C G T
T C G A C A G T C G T A C A G T A G C T C T A G C G T A A G T C C T G A C A T G A T C G A G C T T A C G A G T C G A C T C G A T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAACAGGCCY
YAACBGCC--
 C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAACAGGCCY
TTGACAGC---
 A C G T C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GAACAGGCCY-------
---CAGGCCNNGGCCNN
 C A T G T C G A T G C A T G A C G C T A T A C G T A C G T G A C T A G C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C