Information for 3-CGCGGCTTTTTGC (Motif 3)

A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C
Reverse Opposite:
A C T G A G T C C G T A C T G A C G T A C G T A C G T A A T C G A G T C G T A C C T A G A G T C A C T G
p-value:1e-13
log p-value:-3.100e+01
Information Content per bp:1.825
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 24.7bp
Average Position of motif in Background73.2 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0145.1_Mafb_2/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC-----
---ANATTTTTGCAANTN
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CGCGGCTTTTTGC---
CTTGGCANNNTGCCAA
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

NFATC2/MA0152.1/Jaspar

Match Rank:3
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CGCGGCTTTTTGC-
-------TTTTCCA
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC--
-TTGGCATGGTGCCA
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T
A C G T G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF143/MA0088.2/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC---
CAATGCATTGTGGGTA
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:6
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTTTGC-
----YCTTTGTTCC
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CGCGGCTTTTTGC-
----CCWTTGTYYB
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T
A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:forward strand
Alignment:CGCGGCTTTTTGC---
------ATTTTCCATT
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.48
Offset:5
Orientation:forward strand
Alignment:CGCGGCTTTTTGC
-----CTTTGT--
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C
A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGCGGCTTTTTGC-----
----TTTTTTTTCNNGTN
 A G T C T A C G A G T C A C T G A C T G A T G C C G A T A C G T G C A T A G C T A C G T T A C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A