Information for 9-GGCACTGWGCCAG (Motif 14)

A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
Reverse Opposite:
A T G C C G A T A T C G A T C G G T A C G C A T A T G C C G T A T C A G A C G T C T A G A G T C T A G C
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.763
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.33%
Number of Background Sequences with motif67.4
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets35.5 +/- 14.0bp
Average Position of motif in Background51.3 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGCACTGWGCCAG
CTTGGCANNNTGCCAA
 A C G T A C G T A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGCACTGWGCCAG----
YCAGGCWCAGTACCAGGCTC
 A C G T A C G T A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCACTGWGCCAG
TGGCACCATGCCAA
 A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GGCACTGWGCCAG
GTAGGTCACTGGGTCA-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCACTGWGCCAG
TGGCAGNCTGCCAG
 A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------GGCACTGWGCCAG
NNNNTGAGCACTGTNNG--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGCACTGWGCCAG-
----CTGTTCCTGG
 A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G A C G T
A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GGCACTGWGCCAG
NGTGGGCAT--------
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGCACTGWGCCAG
NNGCNCTGCGCGGC
 A C G T A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

POL002.1_INR/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCACTGWGCCAG
NNNANTGA-----
 A C T G A C T G A G T C G T C A A G T C C G A T A T C G C G T A A C T G A T G C T A G C G C T A A T C G
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T