Information for 5-WCTTTAAAAAGATAGT (Motif 7)

C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
Reverse Opposite:
C T G A A T G C A G C T G C T A A G C T A G T C A G C T A G C T A C G T A C G T G A C T C G T A C G T A C G T A A C T G G C A T
p-value:1e-10
log p-value:-2.510e+01
Information Content per bp:1.764
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 30.3bp
Average Position of motif in Background68.8 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-WCTTTAAAAAGATAGT
GNCTATAAAAGG-----
 A C G T C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A T C G A T C G A T G C A G C T G C T A A C G T C G T A C G T A C T G A C T G A C T A G T A C G A C G T A C G T A C G T A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT
-GTATAAAAGGCGGGG
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT
-GTATAAAAGGCGGGG
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A C G T T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PRDM1/MA0508.1/Jaspar

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT--
---AGAAAGTGAAAGTGA
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:WCTTTAAAAAGATAGT
----GAAAGTGAAAGT
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT
-ATTTGAATT------
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT
ACTATAAATAGA----
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
C T G A G A T C G A C T G T C A C G A T G C T A C G T A G C T A A C G T C T G A T C A G G T C A A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-WCTTTAAAAAGATAGT
CGGTTTCAAA-------
 A C G T C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:WCTTTAAAAAGATAGT
----AGAAACGAAAGT
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
A C G T A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:WCTTTAAAAAGATAGT
TCTAAAAATAGA----
 C G T A T A G C A C G T C G A T A C G T C G T A C G T A C G T A C T G A C T G A A C T G C T G A C G A T C T G A A T C G A G C T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T A C G T A C G T